Genomics, metagenomics, and pathogen evolution.

I am an Associate Professor of Biology at Northern Arizona University and Assistant Director of the Pathogen and Microbiome Institute. My research integrates comparative and functional genomics, bioinformatics, and environmental microbiology to understand pathogen evolution and improve diagnostics.

Comparative Genomics Pathogen Evolution Environmental Metagenomics Bioinformatics
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About

My research focuses on microbial genomics, transcriptomics, and bioinformatics with an emphasis on human pathogens. I lead projects on comparative genomics, SNP detection, and environmental surveillance of emerging pathogens.

  • Associate Professor, Northern Arizona University (2021–present)
  • Assistant Professor, NAU (2015–2021)
  • Postdoc, Translational Genomics Research Institute (2012–2015)
  • Ph.D., Colorado School of Mines (2009)

Selected Publications

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Full list available on Google Scholar

Grants & Projects

Valley Fever Surveillance in Arizona

ABOR, 2022–present · Role: Co-PI

Tri-university collaboration to map and characterize Coccidioides where it grows.

Guinea Worm Diagnostic Development

Carter Center, 2024–present · Role: PI

Developing antibody-based diagnostics in canines to support eradication efforts.

Bioinformatics Tools for Pathogen Detection

NIH/DHS/DTRA funded

Development of computational pipelines (e.g., LS-BSR, NASP, VaST) for rapid pathogen typing and SNP detection.

Teaching

  • Grant Writing (BIO537), 2017–2025
  • Pan-Biology (BIO504), 2023–2025
  • Bioremediation (BIO409/BIO509), Fall 2017
  • PMI Seminar Series (BIO498/698), 2023–2025

Awards

  • Hooper Undergraduate Research Award Mentor of the Year, 2023
  • Outstanding Project of the Year Award, SERDP, 2005
  • ASM Student Travel Award, 2007

Lab Members

Chandler Roe

Chandler Roe, Ph.D.

Postdoctoral Researcher

Charles Williamson

Charles Williamson, Ph.D.

Postdoctoral Researcher

Amber Jones

Amber Jones

Graduate Student

CV

Download CV (PDF)